Part 1 - Modelling outbreaks

In this part of the tutorial you will:

• Install metawards and perform the first model runs that simulate the outbreak of a fictional disease known as the lurgy.

• Learn how to seed an outbreak in specific city.

• Learn how to run a reproducible calculation.

• Learn how to perform multiple model runs and analyse the output that is collated in the results.csv.bz2 file.

• Discover metawards-plot and use that to make simple plots.

• Getting Started
  • Introducing the Lurgy
  • Seeding an outbreak
  • Repeating a calculation
  • Using config files for inputs
• Multiple model runs
  • Performing multiple model runs
  • The results.csv.bz2 file
• Plotting outputs
  • Understanding the graphs
  • Jupyter notebooks